diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 5cad9b90..45e733bc 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -9,7 +9,6 @@ repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v4.6.0
     hooks:
-      - id: end-of-file-fixer
       - id: trailing-whitespace
         exclude: test/.*\.py
       - id: check-yaml
@@ -19,14 +18,12 @@ repos:
       - id: check-case-conflict
       - id: check-added-large-files
       - id: detect-private-key
-      - id: forbid-new-submodules
       - id: pretty-format-json
         exclude: demo.ipynb
         args: ['--autofix', '--no-sort-keys', '--indent=4']
       - id: end-of-file-fixer
       - id: mixed-line-ending
 
-
   -   repo: https://github.com/PyCQA/bandit
       rev: '1.7.9'
       hooks:
@@ -34,16 +31,6 @@ repos:
           args: ["-c", "pyproject.toml"]
           additional_dependencies: ["bandit[toml]"]
 
-  -   repo: https://github.com/pycqa/isort
-      rev: 5.13.2
-      hooks:
-      -   id: isort
-          name: isort (python)
-      -   id: isort
-          name: isort (pyi)
-          types: [pyi]
-
-
   -   repo: https://github.com/astral-sh/ruff-pre-commit
       rev: v0.6.1
       hooks:
diff --git a/pyproject.toml b/pyproject.toml
index f0ff6d85..0c281c04 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -90,9 +90,6 @@ mkdocs-jupyter = "^0.24.3"
 mkdocs-git-committers-plugin-2 = "^2.2.3"
 mkdocs-git-revision-date-localized-plugin = "^1.2.4"
 
-[tool.isort]
-line_length = 88
-profile = "black"
 
 [tool.bandit]
 target = ["test", "supervision"]
@@ -157,7 +154,7 @@ indent-width = 4
 
 [tool.ruff.lint]
 # Enable pycodestyle (`E`) and Pyflakes (`F`) codes by default.
-select = ["E", "F"]
+select = ["E", "F", "I", "A", "Q", "W"]
 ignore = []
 # Allow autofix for all enabled rules (when `--fix`) is provided.
 fixable = [
@@ -226,6 +223,10 @@ convention = "google"
 # Flag errors (`C901`) whenever the complexity level exceeds 5.
 max-complexity = 20
 
+[tool.ruff.lint.isort]
+order-by-type = true
+no-sections = false
+
 [tool.ruff.format]
 # Like Black, use double quotes for strings.
 quote-style = "double"